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Patrick Skillman-Lawrence
mhc_rank
Commits
cf484755
Commit
cf484755
authored
5 years ago
by
Timothy ODonnell
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downloads-generation/data_evaluation/cluster_submit_script_header.mssm_hpc.lsf
+3
-17
3 additions, 17 deletions
...data_evaluation/cluster_submit_script_header.mssm_hpc.lsf
with
3 additions
and
17 deletions
downloads-generation/data_evaluation/cluster_submit_script_header.mssm_hpc.lsf
+
3
−
17
View file @
cf484755
#!/bin/bash
#BSUB -J MHCf # Job name
#BSUB -P acc_nkcancer # allocation account or Unix group
#BSUB -q gpu # queue
#BSUB -R rusage[ngpus_excl_p=1] # 1 exclusive GPU
#BSUB -q premium # queue
#BSUB -R span[hosts=1] # one node
#BSUB -n 1 # number of compute cores
#BSUB -W
1
0:00 # walltime in HH:MM
#BSUB -R rusage[mem=
20
000] # mb memory requested
#BSUB -W
4
0:00 # walltime in HH:MM
#BSUB -R rusage[mem=
45
000] # mb memory requested
#BSUB -o %J.stdout # output log (%J : JobID)
#BSUB -eo %J.stderr # error log
#BSUB -L /bin/bash # Initialize the execution environment
...
...
@@ -24,19 +23,6 @@ export PYTHONUNBUFFERED=1
export
KMP_SETTINGS
=
1
free
-m
module add cuda/10.0.130
module list
export
CUDNN_HOME
=
/hpc/users/odonnt02/oss/cudnn/cuda
export
LD_LIBRARY_PATH
=
$CUDNN_HOME
/lib64:
$LD_LIBRARY_PATH
export
CMAKE_LIBRARY_PATH
=
$CUDNN_HOME
/lib64:
$CMAKE_LIBRARY_PATH
export
INCLUDE_PATH
=
$CUDNN_HOME
/include:
$INCLUDE_PATH
export
C_INCLUDE_PATH
=
$CUDNN_HOME
/include:
$C_INCLUDE_PATH
export
CPLUS_INCLUDE_PATH
=
$CUDNN_HOME
/include:
$CPLUS_INCLUDE_PATH
export
CMAKE_INCLUDE_PATH
=
$CUDNN_HOME
/include:
$CMAKE_INCLUDE_PATH
python
-c
'import tensorflow as tf ; print("GPU AVAILABLE" if tf.test.is_gpu_available() else "GPU NOT AVAILABLE")'
env
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