Skip to content
Snippets Groups Projects
Commit e6861c3f authored by Tim O'Donnell's avatar Tim O'Donnell
Browse files

update

parent 527e86cb
No related branches found
No related tags found
No related merge requests found
Hide whitespace changes
Inline Side-by-side
downloads-generation/data_evaluation/GENERATE.sh
+ 3
− 1
View file @ e6861c3f
...@@ -96,8 +96,10 @@ else ...@@ -96,8 +96,10 @@ else
time mhcflurry-predict \ time mhcflurry-predict \
benchmark.monoallelic.csv.bz2 \ benchmark.monoallelic.csv.bz2 \
--allele-column hla \ --allele-column hla \
--prediction-column-prefix prediction.no_additional_ms \
--models "$(mhcflurry-downloads path models_class1_pan_variants)/models.no_additional_ms" \ --models "$(mhcflurry-downloads path models_class1_pan_variants)/models.no_additional_ms" \
--out benchmark.monoallelic.predictions.csv --out benchmark.monoallelic.predictions.csv \
--no-throw
bzip2 -f benchmark.monoallelic.predictions.csv bzip2 -f benchmark.monoallelic.predictions.csv
ls -lh benchmark.monoallelic.predictions.csv.bz2 ls -lh benchmark.monoallelic.predictions.csv.bz2
fi fi
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment