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Commit ddd98892 authored by Alex Rubinsteyn's avatar Alex Rubinsteyn
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restrict alleles in travis setup

parent 1d2d7228
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......@@ -39,13 +39,14 @@ script:
# download training data
- script/download-kim-2013-dataset.sh
- script/download-iedb.sh
- script/create-iedb-class1-dataset.py
# only install data for A*01:01 and A*02:01 for testing
- script/create-iedb-class1-dataset.py --alleles HLA-A*01:01 HLA-A*02:01
- script/create-combined-class1-dataset.py
# only installing A0101 and A0201 for testing purposes and with very limited
# training
- >
mhcflurry-train-class1-allele-specific-models.py
--alleles HLA-A0101 HLA-A0101
--alleles HLA-A0101 HLA-A0201
--embedding-size 4
--hidden-layer-size 4
--training-epochs 5
......
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