diff --git a/.travis.yml b/.travis.yml index 45dd1f9f5b72fc5c5821c2d903ac9555260793de..860401d0098145a3da4fdc877e9751b72cd1f32f 100644 --- a/.travis.yml +++ b/.travis.yml @@ -39,13 +39,14 @@ script: # download training data - script/download-kim-2013-dataset.sh - script/download-iedb.sh - - script/create-iedb-class1-dataset.py + # only install data for A*01:01 and A*02:01 for testing + - script/create-iedb-class1-dataset.py --alleles HLA-A*01:01 HLA-A*02:01 - script/create-combined-class1-dataset.py # only installing A0101 and A0201 for testing purposes and with very limited # training - > mhcflurry-train-class1-allele-specific-models.py - --alleles HLA-A0101 HLA-A0101 + --alleles HLA-A0101 HLA-A0201 --embedding-size 4 --hidden-layer-size 4 --training-epochs 5