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Building Warp3D on Oakley

Last edited by Eric Franz

Serial (OpenMP only)

  1. Download the publicly available version WARP3D 17.5.8 to Oakley
  2. Extract the tarball
$ tar xzf warp3d_distribution_17.5.8.tar.gz
  1. Go into the extracted directory and set the $WARP3D_HOME environment variable
$ cd warp3d_distribution_17.5.8
$ export WARP3D_HOME=$PWD
  1. Add necessary modules and libraries
$ module load intel/14.0.0.080

Note, this should swap the currently loaded intel compiler libraries (as of writing this --- intel/12.1.4.319) with intel/14.0.0.080.

  1. Go into the src directory and run Makewarp.bash. Then follow the interactive prompt
$ cd $WARP3D_HOME/src
$ ./Makewarp.bash

** Driver shell script to build WARP3D on Linux and Mac OS X **

Select supported platform:
1) Linux (64-bit)     3) Windows (7,8)
2) Mac OS X (10.9.x)  4) Exit
Select choice: 1

Compile OpenMP-only version or hybrid (MPI/OpenMP) version?
1) OpenMP
2) Hybrid
3) Exit
Select choice: 1

Simple (defaults, no prompts) or advanced (prompt) mode?
1) Simple
2) Advanced
3) Help
4) Exit
Select choice: 1

... Setting default options & performing checks to
... ensure your system and the WARP3D directories
... are configured correctly.

 > MPI source code already uninstalled...
 > hypre source code already uninstalled...

>> Building filter program...

Number of concurrent compile processes allowed? (default 1): 1
... Starting make program for Linux ....
  1. If all goes well, the executable should be located at ../run_linux_em64t/warp3d.omp. Finally, copy the executable to any directory you would like.
$ cd $WARP3D_HOME/run_linux_em64t
$ cp warp3d.omp ~/bin/.

Parallel (OpenMP + MPI)

Repeat all the steps for the Serial build except where otherwise noted.

  1. ...
  2. ...
  3. ...
  4. ...
  5. If you haven't already, you will need to compile hypre-2.9.0b and metis-4.0
$ cd $WARP3D_HOME/linux_packages/source/hypre-2.9.0b

Edit the make_hypre script with proper compilers

# $WARP3D_HOME/linux_packages/source/hypre-2.9.0b/make_hypre
...
MCC=mpicc
MCX=mpicxx
MFT=mpif90
...

You can ignore the -m warnings. Then continue with building...

$ ./make_hypre
$ cd $WARP3D_HOME/linux_packages/source/metis-4.0
$ ./compile_metis
  Input C compiler (CC)
  Default: gcc
  : icc

Now compile WARP3D.

$ cd $WARP3D_HOME/src
$ ./Makewarp.bash

** Driver shell script to build WARP3D on Linux and Mac OS X **

Select supported platform:
1) Linux (64-bit)     3) Windows (7,8)
2) Mac OS X (10.9.x)  4) Exit
Select choice: 1

Compile OpenMP-only version or hybrid (MPI/OpenMP) version?
1) OpenMP
2) Hybrid
3) Exit
Select choice: 2

Simple (defaults, no prompts) or advanced (prompt) mode?
1) Simple
2) Advanced
3) Help
4) Exit
Select choice: 2


In the following prompts enter the values you want for each setting.
If you leave a line blank the value will be set to the default.
Note: these values will not be checked for correctness as in the simple mode.

Fortran compiler
Default: mpiifort
: mpif90

hypre root directory
Default: /nfs/17/jnicklas/dev/warp3d_distribution_17.5.8/linux_packages
: 


 > MPI source code already installed...
 > hypre source code already installed...

>> Building filter program...
ld: warning: libhwloc.so.1, needed by /usr/local/mvapich2/1.9-intel/lib/libmpichf90.so, may conflict with libhwloc.so.5
ld: warning: libhwloc.so.1, needed by /usr/local/mvapich2/1.9-intel/lib/libmpichf90.so, may conflict with libhwloc.so.5

Number of concurrent compile processes allowed? (default 1): 1

... Starting make program for Linux ....

Note: I am not sure of the consequences incurred involving the libhwloc.so warnings.

  1. If all goes well, the executable should be located at ../run_linux_em64t/warp3d.mpi_omp. Finally, copy the executable to any directory you would like.
$ cd $WARP3D_HOME/run_linux_em64t
$ cp warp3d.mpi_omp ~/bin/.
  1. You can also now compile patwarp by running...
$ cd $WARP3D_HOME/patwarp
$ ./compile_patwarp_linux64
$ cd $WARP3D_HOME/run_linux_em64t
$ cp patwarp.go ~/bin/.