Commits · 334907bfe5bd984a0f34ef60d191f98560f5ac4f · Patrick Skillman-Lawrence / mhc_rank

Jun 11, 2017
- allow get a list of supported alleles or peptide lengths from CLI · 334907bf
  B. Arman Aksoy authored 7 years ago
  
  334907bf
May 25, 2017
- Switch downloads_command to use mkstemp instead of NamedTemporaryFile for... · 503c8492
  Tim O'Donnell authored 7 years ago
  
  Switch downloads_command to use mkstemp instead of NamedTemporaryFile for windows support. Fixes #79
  503c8492
- small tweaks · 62794808
  Tim O'Donnell authored 7 years ago
  
  62794808
- Add more output to mhcflurry-predict · 6fa483d7
  Tim O'Donnell authored 7 years ago
  
  6fa483d7
- Add models_class1_experiments1 download, tweak travis config, attempt to fix test for py2.7 · e5a7ee94
  Tim O'Donnell authored 7 years ago
  
  e5a7ee94
May 24, 2017
- Update example notebook and fix tests · 7f6bffeb
  Tim O'Donnell authored 7 years ago
  
  7f6bffeb
- Fix test · fd7a2286
  Tim O'Donnell authored 7 years ago
  
  fd7a2286
- Fix antigen processing errors, fix lint issues · 4d9c164b
  Tim O'Donnell authored 7 years ago
  
  4d9c164b
- updates · 37aa3f37
  Tim O'Donnell authored 7 years ago
  
  37aa3f37
May 23, 2017
- updates · 3ec5dbe1
  Tim O'Donnell authored 7 years ago
  
  3ec5dbe1
- docs update · 057e272a
  Tim O'Donnell authored 7 years ago
  
  057e272a
May 22, 2017
- update requirements · 94f4c437
  Tim O'Donnell authored 7 years ago
  
  94f4c437
- Add models_class1_experimental_variations1 · 3239e437
  Tim O'Donnell authored 7 years ago
  
  3239e437
- fix peptide encoding · f73e73b2
  Tim O'Donnell authored 7 years ago
  
  f73e73b2
May 21, 2017
- fixes · 5737ed7a
  Tim O'Donnell authored 7 years ago
  
  5737ed7a
- updates · 6cac6ebd
  Tim O'Donnell authored 7 years ago
  
  6cac6ebd
- fixes · dd062baa
  Tim O'Donnell authored 7 years ago
  
  dd062baa
- update · fbbef344
  Tim O'Donnell authored 7 years ago
  
  fbbef344
- renames · 053361ea
  Tim O'Donnell authored 7 years ago
  
  053361ea
May 18, 2017
- add class1 mdoels download · d293a5ee
  Tim O'Donnell authored 7 years ago
  
  d293a5ee
May 17, 2017
- Configure logging · b651138e
  Tim O'Donnell authored 7 years ago
  
  b651138e
- Add training script, new models, and downloads generation · 925d42fa
  Tim O'Donnell authored 7 years ago
  
  925d42fa
- Begin rewrite · 56f84119
  Tim O'Donnell authored 7 years ago
  
  pre-1.0.0-alpha
  
  56f84119
May 15, 2017
- Better debug output in null check · c6352472
  Tim O'Donnell authored 7 years ago
  
  c6352472
- Attempt to fix linter error · 298dfae2
  Tim O'Donnell authored 7 years ago
  
  298dfae2
May 10, 2017
- add pseudosequences · 2755bd04
  Tim O'Donnell authored 7 years ago
  
  2755bd04
Apr 17, 2017
- update · 6b592c81
  Tim O'Donnell authored 8 years ago
  
  6b592c81
Mar 24, 2017
- Switch predict command to use ensemble models by default · f2160e59
  Tim O'Donnell authored 8 years ago
  
  f2160e59
- Bump models release version to 0.2.0 · f54405dd
  Tim O'Donnell authored 8 years ago
  
  0.2.0
  
  f54405dd
- Add docs · 458cb0c3
  Tim O'Donnell authored 8 years ago
  
  458cb0c3
- fixes to peptide encoding · 1951332e
  Tim O'Donnell authored 8 years ago
  
  1951332e
- decrease stringency of test_basic in test_ensemble · 05d7568a
  Tim O'Donnell authored 8 years ago
  
  05d7568a
- fix predictions for duplicate peptides · 6551068d
  Tim O'Donnell authored 8 years ago
  
  6551068d
- fix peptide encoding · 46dae4be
  Tim O'Donnell authored 8 years ago
  
  46dae4be
- Bug fixes and documentation · f9394145
  Tim O'Donnell authored 8 years ago
  
  f9394145
- update single models download · 287b29c4
  Tim O'Donnell authored 8 years ago
  
  287b29c4
- Switch default predictor to ensemble, fix download bug, add more imports to... · 2a318b10
  Tim O'Donnell authored 8 years ago
  
  Switch default predictor to ensemble, fix download bug, add more imports to package-level __init__, update example ipython notebook
  2a318b10
- fix tests · 1a06153a
  Tim O'Donnell authored 8 years ago
  
  1a06153a
- Much better model serialization. Avoid regnerating peptide encoding in ensemble models. Other fixes · b7404349
  Tim O'Donnell authored 8 years ago
  
  b7404349
- fixes · cd44ff14
  Tim O'Donnell authored 8 years ago
  
  cd44ff14