.travis.yml

experiments/best-synthetic-data-hyperparams.py

experiments/complete_binding_affinities.py

experiments/compute-allele-similarities.py

experiments/extend-test-predictions.py

experiments/matrix-completion-accuracy.py

experiments/matrix-completion-hyperparameter-search.py

experiments/matrix_completion_helpers.py

experiments/model-selection.py

experiments/synthesize-augmented-dataset.py

experiments/train-models-with-synthetic-pretraining.py

experiments/training_helpers.py

mhcflurry/args.py

mhcflurry/class1_allele_specific_kmer_ic50_predictor_base.py

mhcflurry/class1_binding_predictor.py

mhcflurry/common.py

mhcflurry/dataset.py

mhcflurry/dataset_helpers.py

mhcflurry/ensemble.py

mhcflurry/feedforward_hyperparameters.py