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Commit 3e957f1e authored by Tim O'Donnell's avatar Tim O'Donnell
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fix

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downloads-generation/data_mass_spec_benchmark/GENERATE.sh
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......@@ -27,7 +27,7 @@ cd $SCRATCH_DIR/$DOWNLOAD_NAME
cp $SCRIPT_DIR/write_proteome_peptides.py .
PEPTIDES=$(mhcflurry-downloads path data_mass_spec_annotated)/all_sequences.csv.bz2
PEPTIDES=$(mhcflurry-downloads path data_mass_spec_annotated)/annotated_ms.csv.bz2
REFERENCES_DIR=$(mhcflurry-downloads path data_references)
python write_proteome_peptides.py \
......
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