Skip to content
Snippets Groups Projects
Select Git revision
  • publish
  • master default protected
  • arch2
  • recover_lost_data
  • manuscript
  • improved-allele-parsing
  • 202010-phospho
  • gh-pages
  • pre-2.0
  • 1.7.0c
  • 3-flank-variant
  • 1.7.0b
  • 1.7.0
  • pre-presentation-refactor2
  • 20200121_pre_presentation_refactor
  • issue-149
  • 201911
  • ligandome-prediction
  • docs-pan-motifs
  • v1.3
  • pre-2.1
  • v2.0.1
  • v2.0.0
  • pre-2.0
  • 1.6.1
  • pre-1.7.0
  • pre_presentation_refactor
  • 1.6.0
  • 1.4.0
  • pre-1.4.0
  • pan-dev1
  • 1.2.2
  • 1.2.0
  • pre-1.2.1
  • pre-1.2
  • pre-1.1
  • 1.0.0
  • pre-1.0
  • 0.9.2
  • 0.9.1
40 results
Compare
Name Last commit Last update
..
GENERATE.sh
README.md
README.md

Published datasets

These datasets are derived from publications and do not change.

To generate this download run:

./GENERATE.sh

This download contains the BD2009, BD2013, and BLIND datasets from Dataset size and composition impact the reliability of performance benchmarks for peptide-MHC binding predictions.

BD2013 (augmented with more recent data from IEDB) are used to train the production MHCflurry models. BD2009 and BLIND are useful for performing validation on held-out data.

The other published data sets correspond to the publications indicated in GENERATE.sh.