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Created with Raphaël 2.2.03Aug31Jul3027241926Jun2213121125May2423222322211817151017Apr24Mar232221201917161411632128Feb262319161514131211109849Jan12Dec115Oct26Sep171615130Aug3118Jul1224Jun231732121May1918171413111096543229Apr2821201918718Feb171617Dec1313Nov124330Oct2826232221201917151412643216Sep28Jul14132130Jun2928Reuse Keras models optimizationMerge pull request #98 from hammerlab/ensemble12Change ensemble size from 8 to 12remove extra linerohan/predictio…rohan/prediction_speedprediction speed cachingMerge pull request #94 from hammerlab/bump-keras-version0.9.10.9.1Fix version in downloads.ymlTrain models only on alleles with >=200 IEDB measurements instead of 100Parallelize models_class1_experiments1 GENERATE scriptFix incorrect L1 hyperparameter in hyperparameters-0local_noL1.jsonBump keras version, set mhcflurry version to 0.9.1Merge pull request #93 from hammerlab/script-updatesScript and experiment updatesAdd more experiments to models_class1_experiments. Add --only-quantitative option to class 1 training scriptadd-hyperparame…add-hyperparameters-baseAdd hyperparameters-base to models_class1_experimentsAdd --no-throw to predictMerge pull request #90 from hammerlab/timodonnell-patch-1Bump travis python 3 version to 3.6Merge pull request #89 from hammerlab/get-supportedbetter group CLI options for clarityallow get a list of supported alleles or peptide lengths from CLIUpdate author email in setup.py to be valid formatMerge pull request #86 from hammerlab/rewrite1Switch downloads_command to use mkstemp instead of NamedTemporaryFile for windows support. Fixes #79small tweaksmake tensorflow backend the defaultTest both tensorflow and theano on travisFix test, update travis to run tests using both tensorflow and theano backendsAdd more output to mhcflurry-predictAdd models_class1_experiments1 download, tweak travis config, attempt to fix test for py2.7Update travis and package requirementsfix testFix testrefactor testsupdate readmeUpdate example notebook and fix testsfixFix testFix antigen processing errors, fix lint issuesupdates
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