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Created with Raphaël 2.2.017May151017Apr24Mar232221201917161411632128Feb262319161514131211109849Jan12Dec115Oct26Sep171615130Aug3118Jul1224Jun231732121May1918171413111096543229Apr2821201918718Feb171617Dec1313Nov124330Oct2826232221201917151412643216Sep28Jul14132130Jun2928Add training script, new models, and downloads generationBegin rewritepre-1.0.0-alphapre-1.0.0-alphaMerge pull request #85 from hammerlab/pan-allele-class1Better debug output in null checkAttempt to fix linter erroradd pseudosequencesupdateSwitch predict command to use ensemble models by defaultBump models release version to 0.2.00.2.00.2.0Merge pull request #84 from hammerlab/add-class1-ensemble-rebasedupdate readmeadd-class1-ense…add-class1-ensemble-rebasedAdd docsfixes to peptide encodingdecrease stringency of test_basic in test_ensemblefix predictions for duplicate peptidesfix peptide encodingBug fixes and documentationfix linter errorPin theano==0.8.2fix test_class1_allele_specific_cv_and_train_commanupdate single models downloadupdate travisupdate notebookSwitch default predictor to ensemble, fix download bug, add more imports to package-level __init__, update example ipython notebookfix testsMuch better model serialization. Avoid regnerating peptide encoding in ensemble models. Other fixesadd mhcflurry models reportfixesAdd profling tests for ensemble models, many small fixesfixessmall fixesUpdate downloads.yml, several renamesrename Dataset to AffinityMeasurementDataset, fix bug in tests/test_ensemble.pymove measurement collection to parent moduleAdd more fields to ensemble manifestfixesAdd SIGUSR1 hook to ensemble trainingEnsemble models: return reference (using Kubeface remote_object support) to trained models instead of trained models themselvespy2 fixImputation fix