Commits · e836c245261a781e38c9711e4ae56ab276f9a3ce · Patrick Skillman-Lawrence / mhc_rank

Mar 24, 2017
- fix · e836c245
  Tim O'Donnell authored 8 years ago
  
  e836c245
- fixes · a9bac0c6
  Tim O'Donnell authored 8 years ago
  
  a9bac0c6
- Use all data in imputation · ba5620ea
  Tim O'Donnell authored 8 years ago
  
  ba5620ea
- fixes · b80ab1a5
  Tim O'Donnell authored 8 years ago
  
  b80ab1a5
- fixes · 30010218
  Tim O'Donnell authored 8 years ago
  
  30010218
- fix test · 420d8b89
  Tim O'Donnell authored 8 years ago
  
  420d8b89
- Add ensemble train command · 115f85e4
  Tim O'Donnell authored 8 years ago
  
  115f85e4
- basic tests working for ensembles · 8da53293
  Tim O'Donnell authored 8 years ago
  
  8da53293
- add ensemble unit tests. Not passing currently. · d235e928
  Tim O'Donnell authored 8 years ago
  
  d235e928
- First cut on class1 ensemble models · 1d0a6813
  Tim O'Donnell authored 8 years ago
  
  1d0a6813
- small fixes · 20e8e51e
  Tim O'Donnell authored 8 years ago
  
  20e8e51e
Feb 16, 2017
- more output in tests · 3c0e8626
  Tim O'Donnell authored 8 years ago
  
  3c0e8626
- Add MHCBindingComponentModelBase · 253304d0
  Tim O'Donnell authored 8 years ago
  
  253304d0
Feb 15, 2017
- more tests · dec7c6dc
  Tim O'Donnell authored 8 years ago
  
  dec7c6dc
- fix · dfe6f88f
  Tim O'Donnell authored 8 years ago
  
  dfe6f88f
Feb 14, 2017
- Ensemble fitting · 9d8c9efa
  Tim O'Donnell authored 8 years ago
  
  9d8c9efa
Feb 13, 2017
- fix · d583f540
  Tim O'Donnell authored 8 years ago
  
  d583f540
Feb 12, 2017
- fix · de179804
  Tim O'Donnell authored 8 years ago
  
  de179804
- Simpler cache handling · 1c1e75c6
  Tim O'Donnell authored 8 years ago
  
  1c1e75c6
Feb 11, 2017
- More test output · 337b1039
  Tim O'Donnell authored 8 years ago
  
  337b1039
- codes cleanup · 14cf5749
  Tim O'Donnell authored 8 years ago
  
  14cf5749
- Add test for PresentationModel · ec75a7b6
  Tim O'Donnell authored 8 years ago
  
  ec75a7b6
Feb 10, 2017
- Initial implementation of antigen presentation prediction infrastructure · dfdbd8a4
  Tim O'Donnell authored 8 years ago
  
  dfdbd8a4
- remove spurious absolute mhcflurry import · fd6fdd75
  Tim O'Donnell authored 8 years ago
  
  fd6fdd75
- Comment tweaks · 9d5d36b0
  Tim O'Donnell authored 8 years ago
  
  9d5d36b0
Feb 09, 2017
- fixes · 2015dfd6
  Tim O'Donnell authored 8 years ago
  
  2015dfd6
- got rid of package_metadata · 5359dc7f
  Alex Rubinsteyn authored 8 years ago
  
  5359dc7f
- got rid of unnecessary PY2 import · 33218895
  Alex Rubinsteyn authored 8 years ago
  
  33218895
- added comment to DropMask · 5f3b0849
  Alex Rubinsteyn authored 8 years ago
  
  5f3b0849
Feb 08, 2017
- adding keras layers for dealing with masks in variable length sequence inputs · 1a257560
  Alex Rubinsteyn authored 8 years ago
  
  1a257560
Jan 09, 2017
- Swith to using parallel_backend.map instead of parallel_backend.submit, to be... · fc26e687
  Tim O'Donnell authored 8 years ago
  
  Swith to using parallel_backend.map instead of parallel_backend.submit, to be compatable with kubeface
  fc26e687
- basic support for kubeface · bc78f82f
  Tim O'Donnell authored 8 years ago
  
  bc78f82f
- allow commas in peptide and allele strings for mhcflurry-predict, incrememented keras version · 9ef82bae
  Alex Rubinsteyn authored 8 years ago
  
  9ef82bae
- only install futures for PY2 · c116016a
  Alex Rubinsteyn authored 8 years ago
  
  c116016a
Sep 26, 2016
- Update docs · 03f44c8f
  Tim O'Donnell authored 8 years ago
  
  03f44c8f
- attempt to fix travis · 9727cf7e
  Tim O'Donnell authored 8 years ago
  
  9727cf7e
- Update README · 1d1f5aef
  Tim O'Donnell authored 8 years ago
  
  1d1f5aef
- attempt to fix travis · a8dae372
  Tim O'Donnell authored 8 years ago
  
  a8dae372
- reorganize parallel code using ParallelBackend class · c6f884c5
  Tim O'Donnell authored 8 years ago
  
  c6f884c5
- Add mhcflurry-predict tool · d5f9f405
  Tim O'Donnell authored 8 years ago
  
  Fixes #54
  d5f9f405