Important optimization for pan-allele models: pass network the 'name' of the...
Important optimization for pan-allele models: pass network the 'name' of the allele rather than the sequence. Network uses a fixed non-trianable allele encoding that maps allele 'names' to sequences.
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- mhcflurry/allele_encoding.py 54 additions, 50 deletionsmhcflurry/allele_encoding.py
- mhcflurry/class1_affinity_predictor.py 28 additions, 17 deletionsmhcflurry/class1_affinity_predictor.py
- mhcflurry/class1_neural_network.py 58 additions, 23 deletionsmhcflurry/class1_neural_network.py
- test/test_allele_encoding.py 0 additions, 19 deletionstest/test_allele_encoding.py
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