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Patrick Skillman-Lawrence
mhc_rank
Commits
bb32f489
Commit
bb32f489
authored
5 years ago
by
Tim O'Donnell
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fix
parent
c2068013
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downloads-generation/data_evaluation/GENERATE.sh
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downloads-generation/data_evaluation/GENERATE.sh
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2 deletions
downloads-generation/data_evaluation/GENERATE.sh
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−
2
View file @
bb32f489
...
...
@@ -110,7 +110,7 @@ mkdir commands
for
kind
in
train_excluded all
do
### AFFINITY PREDICTOR VARIANT: MONOALLELIC
if
[
"
$2
"
==
"continue-incomplete"
]
&&
[
-f
"benchmark.monoallelic.
pre
di
c
tions.
$kind
.csv.bz2"
]
if
[
"
$2
"
==
"continue-incomplete"
]
&&
[
-f
"benchmark.monoallelic.
no_ad
dition
al_m
s.
$kind
.csv.bz2"
]
then
echo
"Reusing existing monoallelic benchmark predictions"
else
...
...
@@ -123,7 +123,7 @@ do
--no-affinity-percentile
\
--out
"
$(
pwd
)
/benchmark.monoallelic.no_additional_ms.
$kind
.csv"
\
--no-throw
>>
commands/monoallelic.
$kind
.sh
echo
bzip2
-f
"
$(
pwd
)
/benchmark.monoallelic.
pre
di
c
tions.
$kind
.csv"
>>
commands/monoallelic.
$kind
.sh
echo
bzip2
-f
"
$(
pwd
)
/benchmark.monoallelic.
no_ad
dition
al_m
s.
$kind
.csv"
>>
commands/monoallelic.
$kind
.sh
fi
...
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