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Commit b5c90cdc authored by Tim O'Donnell's avatar Tim O'Donnell
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update hyperparameters

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downloads-generation/models_class1_no_mass_spec/hyperparameters.yaml
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......@@ -10,13 +10,14 @@
"max_epochs": 500,
"patience": 20,
"early_stopping": true,
"validation_split": 0.2,
"minibatch_size": 128,
"validation_split": 0.1,
"minibatch_size": 512,
"loss": "custom:mse_with_inequalities",
##########################################
# RANDOM NEGATIVE PEPTIDES
##########################################
"random_negative_rate": 0.0,
"random_negative_rate": 0.2,
"random_negative_constant": 25,
"random_negative_affinity_min": 20000.0,
"random_negative_affinity_max": 50000.0,
......
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