docs/generate_class1_pan.py

downloads-generation/data_curated/GENERATE.sh

downloads-generation/data_curated/curate.py

downloads-generation/data_iedb/GENERATE.sh

downloads-generation/data_published/GENERATE.sh

...generation/models_class1_pan/GENERATE.WITH_HPC_CLUSTER.sh

downloads-generation/models_class1_pan/GENERATE.sh

...loads-generation/models_class1_pan/additional_alleles.txt

...dels_class1_pan/cluster_submit_script_header.mssm_hpc.lsf

...dels_class1_pan/cluster_submit_script_header.mssm_hpc.lsf

...models_class1_pan_unselected/GENERATE.WITH_HPC_CLUSTER.sh

...loads-generation/models_class1_pan_unselected/GENERATE.sh

..._pan_unselected/cluster_submit_script_header.mssm_hpc.lsf

.../models_class1_pan_unselected/generate_hyperparameters.py

mhcflurry/calibrate_percentile_ranks_command.py

mhcflurry/class1_affinity_predictor.py

mhcflurry/class1_neural_network.py

mhcflurry/cluster_parallelism.py

mhcflurry/downloads.yml

mhcflurry/random_negative_peptides.py