Merge pull request #21 from hammerlab/test-imputation (a11524f2) · Commits · Patrick Skillman-Lawrence / mhc_rank · GitLab

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a11524f2

Commit a11524f2 authored 8 years ago by Alex Rubinsteyn

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Merge pull request #21 from hammerlab/test-imputation

Added unit for training model with imputed data

parents e6bef3d1 18255b08

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.travis.yml 4 additions, 4 deletions

.travis.yml
mhcflurry/class1_binding_predictor.py 4 additions, 1 deletion

mhcflurry/class1_binding_predictor.py
mhcflurry/data.py 4 additions, 3 deletions

mhcflurry/data.py
mhcflurry/imputation.py 26 additions, 1 deletion

mhcflurry/imputation.py
mhcflurry/predict.py 17 additions, 6 deletions

mhcflurry/predict.py
mhcflurry/serialization_helpers.py 0 additions, 2 deletions

mhcflurry/serialization_helpers.py
requirements.txt 1 addition, 1 deletion

requirements.txt
script/mhcflurry-train-class1-allele-specific-models.py 1 addition, 7 deletions

script/mhcflurry-train-class1-allele-specific-models.py
setup.py 1 addition, 1 deletion

setup.py
test/test_imputation.py 80 additions, 3 deletions

test/test_imputation.py
test/test_predict.py 1 addition, 1 deletion

test/test_predict.py

with 139 additions and 30 deletions

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