.travis.yml

sudo: false  # Use container-based infrastructure
language: python
python:
  - "2.7"
  - "3.6"
before_install:
  - if [[ "$TRAVIS_PYTHON_VERSION" == "2.7" ]]; then
      wget https://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O miniconda.sh;
    else
      wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
    fi
  - bash miniconda.sh -b -p $HOME/miniconda
  - export PATH="$HOME/miniconda/bin:$PATH"
  # reset the shell's lookup table for program name to path mappings
  - hash -r
  - conda config --set always_yes yes --set changeps1 no
  - conda update -q conda
  # Useful for debugging any issues with conda
  - conda info -a
  - free -m
addons:
  apt:
    packages:
    # install pandoc for use with pypandoc for converting the README
    # from markdown to RST
    - pandoc
install:
  - >
      conda create -q -n test-environment python=$TRAVIS_PYTHON_VERSION
      numpy scipy nose pandas matplotlib mkl-service tensorflow pypandoc
  - source activate test-environment
  - pip install nose-timer
  - pip install -r requirements.txt
  - pip install .
  - pip freeze
env:
  global:
    - PYTHONHASHSEED=0
    - KERAS_BACKEND=tensorflow
    - KMP_SETTINGS=TRUE
    - OMP_NUM_THREADS=1

script:
  # download data and models, then run tests
  - mhcflurry-downloads fetch data_curated models_class1 models_class1_pan allele_sequences
  - mhcflurry-downloads info  # just to test this command works
  #- travis_wait 30 nosetests --with-timer -sv
  - bash -c 'for i in $(ls test/test_*.py) ; do echo "Invoking test: $i" ; nosetests -sv $i ; done'