diff --git a/mhcflurry/class1_affinity_prediction/train_allele_specific_models_command.py b/mhcflurry/class1_affinity_prediction/train_allele_specific_models_command.py index 1936e6d7af7a1a2168980598d31f6957bfda3633..5cf79decf022d927ba47280316cc0aca41d37a76 100644 --- a/mhcflurry/class1_affinity_prediction/train_allele_specific_models_command.py +++ b/mhcflurry/class1_affinity_prediction/train_allele_specific_models_command.py @@ -55,10 +55,11 @@ parser.add_argument( parser.add_argument( "--percent-rank-calibration-num-peptides-per-length", type=int, + metavar="N", default=int(1e5), help="Number of peptides per length to use to calibrate percent ranks. " "Set to 0 to disable percent rank calibration. The resulting models will " - "not support percent ranks") + "not support percent ranks. Default: %(default)s.") parser.add_argument( "--n-models", type=int,