From ea359c14c3a66f359e19241ea130382bfcafb126 Mon Sep 17 00:00:00 2001
From: Tim O'Donnell <timodonnell@gmail.com>
Date: Fri, 26 Jan 2018 09:03:01 -0500
Subject: [PATCH] update hyperparameters

---
 .../models_class1_no_mass_spec/hyperparameters.yaml        | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/downloads-generation/models_class1_no_mass_spec/hyperparameters.yaml b/downloads-generation/models_class1_no_mass_spec/hyperparameters.yaml
index 9d38ad1a..545f8d1d 100644
--- a/downloads-generation/models_class1_no_mass_spec/hyperparameters.yaml
+++ b/downloads-generation/models_class1_no_mass_spec/hyperparameters.yaml
@@ -10,13 +10,14 @@
 "max_epochs": 500,
 "patience": 20,
 "early_stopping": true,
-"validation_split": 0.2,
-"minibatch_size": 128,
+"validation_split": 0.1,
+"minibatch_size": 512,
+"loss": "custom:mse_with_inequalities",
 
 ##########################################
 # RANDOM NEGATIVE PEPTIDES
 ##########################################
-"random_negative_rate": 0.0,
+"random_negative_rate": 0.2,
 "random_negative_constant": 25,
 "random_negative_affinity_min": 20000.0,
 "random_negative_affinity_max": 50000.0,
-- 
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