diff --git a/downloads-generation/models_class1_pan/GENERATE.sh b/downloads-generation/models_class1_pan/GENERATE.sh
index bdcc732a56cc9ad7c988f1ae05865e5b56de256c..2ef26eecd502db992e6108a99db55880b356917b 100755
--- a/downloads-generation/models_class1_pan/GENERATE.sh
+++ b/downloads-generation/models_class1_pan/GENERATE.sh
@@ -57,7 +57,7 @@ UNSELECTED_PATH="$(mhcflurry-downloads path models_class1_pan_unselected)"
 # For now we calibrate percentile ranks only for alleles for which there
 # is training data. Calibrating all alleles would be too slow.
 # This could be improved though.
-ALLELE_LIST=$(bzcat "$UNSELECTED_PATH/models.with_mass_spec/train_data.csv.bz2" | cut -f 1 -d , | grep -v allele | uniq | sort | uniq)
+ALLELE_LIST=$(bzcat "$UNSELECTED_PATH/models.combined/train_data.csv.bz2" | cut -f 1 -d , | grep -v allele | uniq | sort | uniq)
 ALLELE_LIST+=$(echo " " $(cat additional_alleles.txt | grep -v '#') )
 
 for kind in combined