diff --git a/mhcflurry/train_pan_allele_models_command.py b/mhcflurry/train_pan_allele_models_command.py index ca48807684cba5773de2d73bf74aa2f6c8af72db..56e4d60b7cbb9f3d22c96a85413ce01d643e7563 100644 --- a/mhcflurry/train_pan_allele_models_command.py +++ b/mhcflurry/train_pan_allele_models_command.py @@ -32,8 +32,6 @@ from .allele_encoding import AlleleEncoding from .encodable_sequences import EncodableSequences from .regression_target import to_ic50, from_ic50 -os.environ["CUDA_VISIBLE_DEVICES"] = "" - # To avoid pickling large matrices to send to child processes when running in # parallel, we use this global variable as a place to store data. Data that is diff --git a/test/test_train_and_related_commands.py b/test/test_train_and_related_commands.py index 197ade0d28463f9dffc539dcf2705a3a17366a84..f6abfd2630108274beb8a2529a94a3bb98fb21fb 100644 --- a/test/test_train_and_related_commands.py +++ b/test/test_train_and_related_commands.py @@ -14,6 +14,8 @@ from numpy.testing import assert_array_less, assert_equal from mhcflurry import Class1AffinityPredictor from mhcflurry.downloads import get_path +os.environ["CUDA_VISIBLE_DEVICES"] = "" + HYPERPARAMETERS = [ { "n_models": 2, diff --git a/test/test_train_pan_allele_models_command.py b/test/test_train_pan_allele_models_command.py index 870c3694fb0a9f0c45b1c3f4f2fb45b0428be0a5..25a9bdc7ed81c87c5a83ba8dd86e0f5bb186cf5e 100644 --- a/test/test_train_pan_allele_models_command.py +++ b/test/test_train_pan_allele_models_command.py @@ -18,6 +18,8 @@ from mhcflurry import Class1AffinityPredictor,Class1NeuralNetwork from mhcflurry.allele_encoding import AlleleEncoding from mhcflurry.downloads import get_path +os.environ["CUDA_VISIBLE_DEVICES"] = "" + HYPERPARAMETERS_LIST = [ {