diff --git a/downloads-generation/models_class1_pan_refined/hyperparameters.yaml b/downloads-generation/models_class1_pan_refined/hyperparameters.yaml index 8e40e769911d5389284df91084098f7b79866501..9dbb95757b5930a1fb7e346901efb1801cdaf83e 100644 --- a/downloads-generation/models_class1_pan_refined/hyperparameters.yaml +++ b/downloads-generation/models_class1_pan_refined/hyperparameters.yaml @@ -2,11 +2,12 @@ # Batch generation ######################### batch_generator_validation_split: 0.1 -batch_generator_batch_size: 1024 +batch_generator_batch_size: 10240 batch_generator_affinity_fraction: 0.5 max_epochs: 500 random_negative_rate: 1.0 random_negative_constant: 25 learning_rate: 0.0001 patience: 5 -min_delta: 0.0 \ No newline at end of file +min_delta: 0.0 +loss_multiallelic_mass_spec_multiplier: 10 diff --git a/mhcflurry/downloads.yml b/mhcflurry/downloads.yml index 3fdcf338eb9f730d442a23b10eddfe6b509c6582..5899f29a2d60db7783ce99e13fef89dcc8421a24 100644 --- a/mhcflurry/downloads.yml +++ b/mhcflurry/downloads.yml @@ -30,7 +30,7 @@ releases: default: false - name: models_class1_pan_refined - url: https://github.com/openvax/mhcflurry/releases/download/1.4.0/models_class1_pan_refined.20191209b.tar.bz2 + url: https://github.com/openvax/mhcflurry/releases/download/1.4.0/models_class1_pan_refined.20191210.tar.bz2 default: false - name: models_class1_pan_variants