From a351f3ff840361f5ad1a92edda4fb5b18dc259b1 Mon Sep 17 00:00:00 2001
From: Timothy ODonnell <odonnt02@li03c03.chimera.hpc.mssm.edu>
Date: Wed, 18 Sep 2019 15:06:16 -0400
Subject: [PATCH] fix
---
mhcflurry/select_pan_allele_models_command.py | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/mhcflurry/select_pan_allele_models_command.py b/mhcflurry/select_pan_allele_models_command.py
index fbc11edf..c931632b 100644
--- a/mhcflurry/select_pan_allele_models_command.py
+++ b/mhcflurry/select_pan_allele_models_command.py
@@ -151,7 +151,8 @@ def run(argv=sys.argv[1:]):
df = pandas.read_csv(args.data)
print("Loaded data: %s" % (str(df.shape)))
- input_predictor = Class1AffinityPredictor.load(args.models_dir)
+ input_predictor = Class1AffinityPredictor.load(
+ args.models_dir, optimization_level=0)
print("Loaded: %s" % input_predictor)
alleles = input_predictor.supported_alleles
--
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