From 7dc92e2f73d70aa07ce7561088c3803303a67de3 Mon Sep 17 00:00:00 2001
From: Tim O'Donnell <timodonnell@gmail.com>
Date: Wed, 2 Oct 2019 17:44:21 -0400
Subject: [PATCH] fix

---
 .../cluster_submit_script_header.mssm_hpc.lsf                  | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/downloads-generation/data_mass_spec_benchmark/cluster_submit_script_header.mssm_hpc.lsf b/downloads-generation/data_mass_spec_benchmark/cluster_submit_script_header.mssm_hpc.lsf
index efa3d10e..714f2e62 100644
--- a/downloads-generation/data_mass_spec_benchmark/cluster_submit_script_header.mssm_hpc.lsf
+++ b/downloads-generation/data_mass_spec_benchmark/cluster_submit_script_header.mssm_hpc.lsf
@@ -22,6 +22,9 @@ export TMPDIR=/local/JOBS/mhcflurry-{work_item_num}
 export PATH=$HOME/.conda/envs/py36b/bin/:$PATH
 export PYTHONUNBUFFERED=1
 export KMP_SETTINGS=1
+export NETMHC_BUNDLE_HOME=$HOME/sinai/git/netmhc-bundle
+export NETMHC_BUNDLE_TMPDIR=/local/JOBS/netmhctmp-{work_item_num}
+export PATH=$NETMHC_BUNDLE_HOME/bin:$PATH
 
 free -m
 
-- 
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