diff --git a/downloads-generation/data_mass_spec_benchmark/cluster_submit_script_header.mssm_hpc.lsf b/downloads-generation/data_mass_spec_benchmark/cluster_submit_script_header.mssm_hpc.lsf index efa3d10e75a65c830a3134387eb5f4fdd4136668..714f2e62c5985d5961c259012f1972f4536031d4 100644 --- a/downloads-generation/data_mass_spec_benchmark/cluster_submit_script_header.mssm_hpc.lsf +++ b/downloads-generation/data_mass_spec_benchmark/cluster_submit_script_header.mssm_hpc.lsf @@ -22,6 +22,9 @@ export TMPDIR=/local/JOBS/mhcflurry-{work_item_num} export PATH=$HOME/.conda/envs/py36b/bin/:$PATH export PYTHONUNBUFFERED=1 export KMP_SETTINGS=1 +export NETMHC_BUNDLE_HOME=$HOME/sinai/git/netmhc-bundle +export NETMHC_BUNDLE_TMPDIR=/local/JOBS/netmhctmp-{work_item_num} +export PATH=$NETMHC_BUNDLE_HOME/bin:$PATH free -m