From 7cd126692b7dfaedc368c2d9a1ffd169c5636238 Mon Sep 17 00:00:00 2001
From: Tim O'Donnell <timodonnell@gmail.com>
Date: Fri, 16 Feb 2018 15:34:34 -0500
Subject: [PATCH] fix
---
mhcflurry/encodable_sequences.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/mhcflurry/encodable_sequences.py b/mhcflurry/encodable_sequences.py
index efe29c14..a27aaf44 100644
--- a/mhcflurry/encodable_sequences.py
+++ b/mhcflurry/encodable_sequences.py
@@ -37,8 +37,8 @@ class EncodableSequences(object):
raise ValueError("Sequence of strings is required")
self.sequences_df = pandas.DataFrame({
"sequence": numpy.array(sequences),
- "sequence_length": numpy.array(sequences),
})
+ self.sequences_df["sequence_length"] = self.sequences.str.len()
self.min_length = self.sequences_df.sequence_length.min()
self.max_length = self.sequences_df.sequence_length.max()
self.sequences = self.sequences_df.sequence.values
--
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