From 78cdb2651e41c42667610636caac663c6f180410 Mon Sep 17 00:00:00 2001
From: Tim O'Donnell <timodonnell@gmail.com>
Date: Sun, 26 Nov 2017 11:10:39 -0500
Subject: [PATCH] fix
---
downloads-generation/models_class1_experiments1/GENERATE.sh | 5 ++++-
1 file changed, 4 insertions(+), 1 deletion(-)
diff --git a/downloads-generation/models_class1_experiments1/GENERATE.sh b/downloads-generation/models_class1_experiments1/GENERATE.sh
index fd137cad..da0354ea 100755
--- a/downloads-generation/models_class1_experiments1/GENERATE.sh
+++ b/downloads-generation/models_class1_experiments1/GENERATE.sh
@@ -8,6 +8,9 @@ SCRATCH_DIR=${TMPDIR-/tmp}/mhcflurry-downloads-generation
SCRIPT_ABSOLUTE_PATH="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)/$(basename "${BASH_SOURCE[0]}")"
SCRIPT_DIR=$(dirname "$SCRIPT_ABSOLUTE_PATH")
+# Terminate children on exit
+trap "trap - SIGTERM && kill -- -$$" SIGINT SIGTERM EXIT
+
mkdir -p "$SCRATCH_DIR"
rm -rf "$SCRATCH_DIR/$DOWNLOAD_NAME"
mkdir "$SCRATCH_DIR/$DOWNLOAD_NAME"
@@ -37,7 +40,7 @@ time mhcflurry-class1-train-allele-specific-models \
--allele $ALLELES 2>&1 | tee -a LOG.standard.txt &
# Model variations on qualitative + quantitative
-for mod in 0local_noL1 0local 2local widelocal dense8 dense16 dense64 noL1 onehot embedding
+for mod in 0local_noL1 0local 2local widelocal dense8 dense32 dense64 noL1 onehot embedding
do
cp $SCRIPT_DIR/hyperparameters-${mod}.yaml .
mkdir models-${mod}
--
GitLab