From 6421e3b04a35e35bcb4f1271e1585d92732e5a53 Mon Sep 17 00:00:00 2001
From: Tim O'Donnell <timodonnell@gmail.com>
Date: Tue, 31 Dec 2019 14:04:12 -0500
Subject: [PATCH] fix
---
downloads-generation/models_class1_pan_variants/GENERATE.sh | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/downloads-generation/models_class1_pan_variants/GENERATE.sh b/downloads-generation/models_class1_pan_variants/GENERATE.sh
index 82994301..3e526c05 100755
--- a/downloads-generation/models_class1_pan_variants/GENERATE.sh
+++ b/downloads-generation/models_class1_pan_variants/GENERATE.sh
@@ -66,7 +66,7 @@ then
python generate_hyperparameters.production.py > hyperparameters.production.yaml
python generate_hyperparameters.py hyperparameters.production.yaml no_pretrain > hyperparameters.no_pretrain.yaml
python generate_hyperparameters.py hyperparameters.no_pretrain.yaml single_hidden > hyperparameters.single_hidden_no_pretrain.yaml
- python generate_hyperparameters.py hyperparameters.compact_peptide.yaml compact_peptide > hyperparameters.compact_peptide.yaml
+ python generate_hyperparameters.py hyperparameters.production.yaml compact_peptide > hyperparameters.compact_peptide.yaml
python normalize_allele_names.py "$(mhcflurry-downloads path allele_sequences)/class1_pseudosequences.csv" --out allele_sequences.34mer.csv
fi
--
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