From 497baf5516e4f2a31dad713a12058c83aced16eb Mon Sep 17 00:00:00 2001
From: Tim O'Donnell <timodonnell@gmail.com>
Date: Fri, 24 Jan 2020 22:02:34 -0500
Subject: [PATCH] fix
---
downloads-generation/models_class1_presentation/GENERATE.sh | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/downloads-generation/models_class1_presentation/GENERATE.sh b/downloads-generation/models_class1_presentation/GENERATE.sh
index 369f70f1..5443356e 100755
--- a/downloads-generation/models_class1_presentation/GENERATE.sh
+++ b/downloads-generation/models_class1_presentation/GENERATE.sh
@@ -90,7 +90,7 @@ fi
mhcflurry-class1-train-presentation-models \
--data "$(pwd)/train_data.csv.bz2" \
--affinity-predictor "$(mhcflurry-downloads path models_class1_pan)/models.combined" \
- --cleavage-predictor-with-flanks "$(mhcflurry-downloads path models_class1_cleavage)/models.selected" \
+ --cleavage-predictor-with-flanks "$(mhcflurry-downloads path models_class1_cleavage)/models" \
--cleavage-predictor-without-flanks "$(mhcflurry-downloads path models_class1_cleavage_variants)/models.selected.no_flank" \
--out-models-dir "$(pwd)/models"
--
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