From 16ff7679969b8cb486a368a53087e65ef653ac24 Mon Sep 17 00:00:00 2001
From: Tim O'Donnell <timodonnell@gmail.com>
Date: Sun, 5 May 2019 19:22:55 -0400
Subject: [PATCH] fix
---
downloads-generation/allele_sequences/make_allele_sequences.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/downloads-generation/allele_sequences/make_allele_sequences.py b/downloads-generation/allele_sequences/make_allele_sequences.py
index e993b17f..0da114b5 100644
--- a/downloads-generation/allele_sequences/make_allele_sequences.py
+++ b/downloads-generation/allele_sequences/make_allele_sequences.py
@@ -62,7 +62,7 @@ def run():
allele_to_sequence = {}
reader = Bio.SeqIO.parse(args.aligned_fasta, "fasta")
for record in reader:
- name = record.description.split()[1]
+ name = record.description.split()[0]
allele_to_sequence[name] = str(record.seq)
print("Read %d aligned sequences" % len(allele_to_sequence))
--
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