diff --git a/downloads-generation/models_class1_pan_unselected/GENERATE.WITH_HPC_CLUSTER.sh b/downloads-generation/models_class1_pan_unselected/GENERATE.WITH_HPC_CLUSTER.sh index f3d651bdc28b27d29aae041e024e8495da911a07..d3d232f7ed81e3e804b7481f8eb6f6eeafbd8946 100755 --- a/downloads-generation/models_class1_pan_unselected/GENERATE.WITH_HPC_CLUSTER.sh +++ b/downloads-generation/models_class1_pan_unselected/GENERATE.WITH_HPC_CLUSTER.sh @@ -34,6 +34,8 @@ date pip freeze git status +mhcflurry-downloads fetch data_curated allele_sequences random_peptide_predictions + cd $SCRATCH_DIR/$DOWNLOAD_NAME export OMP_NUM_THREADS=1 diff --git a/downloads-generation/models_class1_pan_unselected/GENERATE.sh b/downloads-generation/models_class1_pan_unselected/GENERATE.sh index 73171a05821dae5f16b060894bec297446cdcf1d..51676bf09fdc1c4bcb6f3ce83924d481c9736562 100755 --- a/downloads-generation/models_class1_pan_unselected/GENERATE.sh +++ b/downloads-generation/models_class1_pan_unselected/GENERATE.sh @@ -31,6 +31,8 @@ date pip freeze git status +mhcflurry-downloads fetch data_curated allele_sequences random_peptide_predictions + cd $SCRATCH_DIR/$DOWNLOAD_NAME cp $SCRIPT_DIR/generate_hyperparameters.py .