From 06ec1810e1f9d679fa8b8cc6031a707e97ff2d9b Mon Sep 17 00:00:00 2001
From: Timothy ODonnell <odonnt02@li03c03.chimera.hpc.mssm.edu>
Date: Mon, 9 Dec 2019 12:29:02 -0500
Subject: [PATCH] fix
---
.../models_class1_pan/cluster_submit_script_header.mssm_hpc.lsf | 2 +-
downloads-generation/models_class1_pan_refined/GENERATE.sh | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/downloads-generation/models_class1_pan/cluster_submit_script_header.mssm_hpc.lsf b/downloads-generation/models_class1_pan/cluster_submit_script_header.mssm_hpc.lsf
index efa3d10e..ea6234dc 100644
--- a/downloads-generation/models_class1_pan/cluster_submit_script_header.mssm_hpc.lsf
+++ b/downloads-generation/models_class1_pan/cluster_submit_script_header.mssm_hpc.lsf
@@ -28,7 +28,7 @@ free -m
module add cuda/10.0.130 cudnn/7.1.1
module list
-# python -c 'import tensorflow as tf ; print("GPU AVAILABLE" if tf.test.is_gpu_available() else "GPU NOT AVAILABLE")'
+python -c 'import tensorflow as tf ; print("GPU AVAILABLE" if tf.test.is_gpu_available() else "GPU NOT AVAILABLE")'
env
diff --git a/downloads-generation/models_class1_pan_refined/GENERATE.sh b/downloads-generation/models_class1_pan_refined/GENERATE.sh
index 401146ac..7b1e0db5 100755
--- a/downloads-generation/models_class1_pan_refined/GENERATE.sh
+++ b/downloads-generation/models_class1_pan_refined/GENERATE.sh
@@ -29,7 +29,7 @@ then
echo "Num jobs: $NUM_JOBS"
PARALLELISM_ARGS+=" --num-jobs $NUM_JOBS --max-tasks-per-worker 1 --gpus $GPUS --max-workers-per-gpu 1"
else
- PARALLELISM_ARGS+=" --cluster-parallelism --cluster-max-retries 3 --cluster-submit-command bsub --cluster-results-workdir $HOME/mhcflurry-scratch --cluster-script-prefix-path $SCRIPT_DIR/cluster_submit_script_header.mssm_hpc.gpu.lsf"
+ PARALLELISM_ARGS+=" --cluster-parallelism --cluster-max-retries 3 --cluster-submit-command bsub --cluster-results-workdir $HOME/mhcflurry-scratch --cluster-script-prefix-path $SCRIPT_DIR/cluster_submit_script_header.mssm_hpc.lsf"
fi
rm -rf "$SCRATCH_DIR/$DOWNLOAD_NAME"
--
GitLab