From 06b2baa1d487918fa3fbdfc406c649932a1ca354 Mon Sep 17 00:00:00 2001
From: Tim O'Donnell <timodonnell@gmail.com>
Date: Fri, 18 Oct 2019 11:59:18 -0400
Subject: [PATCH] Update GENERATE.sh
fix bad path in models_class1_trained_with_mass_spec download
---
.../models_class1_trained_with_mass_spec/GENERATE.sh | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/downloads-generation/models_class1_trained_with_mass_spec/GENERATE.sh b/downloads-generation/models_class1_trained_with_mass_spec/GENERATE.sh
index bf241994..67295128 100755
--- a/downloads-generation/models_class1_trained_with_mass_spec/GENERATE.sh
+++ b/downloads-generation/models_class1_trained_with_mass_spec/GENERATE.sh
@@ -46,7 +46,7 @@ wc -l test.csv
time mhcflurry-class1-select-allele-specific-models \
--data test.csv \
- --models-dir "$(mhcflurry-downloads path models_class1_unselected)/models" \
+ --models-dir "$(mhcflurry-downloads path models_class1_unselected_with_mass_spec)/models" \
--out-models-dir models \
--scoring combined:mass-spec,mse,consensus \
--consensus-num-peptides-per-length 10000 \
--
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